1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g04966

Spa_g04966 (ATBHLH029, BHLH029,...)


Aliases : ATBHLH029, BHLH029, FIT1, ATBHLH29, FRU, ATFIT1

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04966
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Als_g26760 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38123 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25422 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G112100.1 Ceric.01G112100 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.04G071400.1 Ceric.04G071400 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.20G044500.1 Ceric.20G044500 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G045100.1 Ceric.20G045100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Gb_15579 SCRM2, ICE2 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_11768g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g00510.1 AMS transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mp5g03020.1 AMS transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Sam_g34229 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g42987 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08873 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g19879 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29282 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 474 515
No external refs found!