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  5. Spa_g04989

Spa_g04989


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04989

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00056000 ATBHLH029,... Nutrient uptake.iron uptake.reduction-based strategy... 0.02 OrthoFinder output from all 47 species
AT5G57150 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g024935 ATICE1, ICE1, SCRM bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31653 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38123 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007559 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-894 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007560 ATBHLH029,... bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009834 No alias bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.01G112100.1 Ceric.01G112100 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.20G045100.1 Ceric.20G045100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G064100.1 Ceric.20G064100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G010400.1 Ceric.25G010400 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G058800.1 Ceric.29G058800 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g14460 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21599 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31412 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51705 ATBHLH029,... bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g13552 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029311001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
LOC_Os04g23550.1 LOC_Os04g23550 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_110122g0010 AMS transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_387150g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_44439g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g29253 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06961 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29473 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09269 AMS bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010285 No alias bHLH-type transcription factor & original description: CDS=1-1623 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020579 No alias bHLH-type transcription factor & original description: CDS=1-1245 0.03 OrthoFinder output from all 47 species
Sam_g42987 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g014590.3.1 Solyc05g014590 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.03 OrthoFinder output from all 47 species
Spa_g02622 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14981 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29188 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008463_P008 Zm00001e008463 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e010525_P001 DYT1, Zm00001e010525 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e040186_P002 Zm00001e040186 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e040675_P003 Zm00001e040675 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 251 297
No external refs found!