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  5. Spa_g05409

Spa_g05409


Description : 2S globulin seed storage protein & original description: none


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05409
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00192080 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.03 OrthoFinder output from all 47 species
Adi_g060075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03907 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36197 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01958.t1 Aspi01Gene01958 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68852.t1 Aspi01Gene68852 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0431.g069367 No alias 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G066400.1 Ceric.14G066400 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z042900.1 Ceric.1Z042900 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z043200.1 Ceric.1Z043200 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g34761 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14449 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Gb_07285 No alias no description available(sp|q7m443|chit2_tulsb : 215.0) 0.03 OrthoFinder output from all 47 species
LOC_Os10g28050.1 LOC_Os10g28050 no description available(sp|q7m443|chit2_tulsb : 285.0) 0.02 OrthoFinder output from all 47 species
LOC_Os10g28080.1 LOC_Os10g28080 no description available(sp|q9slp4|chit1_tulsb : 266.0) 0.04 OrthoFinder output from all 47 species
Len_g46226 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16342 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46052 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 111 287
IPR018392 LysM_dom 33 75
No external refs found!