Spa_g05708

Description : not classified & original description: none

Gene families : OG0001752 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001752_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g05708

Target	Alias	Description	ECC score	Gene Family Method
AT1G55800	No alias	Domain of unknown function (DUF2431)	0.01	OrthoFinder output from all 47 species
AT1G55803	No alias	No description available	0.01	OrthoFinder output from all 47 species
AT4G26485	No alias	Domain of unknown function (DUF2431)	0.01	OrthoFinder output from all 47 species
Dac_g20019	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g28113	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g42733	No alias	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Dcu_g39260	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01012535001	No alias	Uncharacterized protein At4g26485 OS=Arabidopsis thaliana	0.09	OrthoFinder output from all 47 species
GSVIVT01014811001	No alias	Heavy metal-associated isoprenylated plant protein 41...	0.03	OrthoFinder output from all 47 species
GSVIVT01014824001	No alias	Heavy metal-associated isoprenylated plant protein 41...	0.04	OrthoFinder output from all 47 species
GSVIVT01014828001	No alias	Uncharacterized protein At4g26485 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01014830001	No alias	Uncharacterized protein At4g26485 OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
GSVIVT01014832001	No alias	Heavy metal-associated isoprenylated plant protein 41...	0.04	OrthoFinder output from all 47 species
GSVIVT01014833001	No alias	No description available	0.05	OrthoFinder output from all 47 species
LOC_Os09g30210.1	LOC_Os09g30210	Heavy metal-associated isoprenylated plant protein 41...	0.08	OrthoFinder output from all 47 species
Msp_g41653	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	None	Extended
BP	GO:0001510	RNA methylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	None	Extended
MF	GO:0008173	RNA methyltransferase activity	None	Extended
MF	GO:0008649	rRNA methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
MF	GO:0016436	rRNA (uridine) methyltransferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0031167	rRNA methylation	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	IEA	Interproscan
BP	GO:0070475	rRNA base methylation	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140102	catalytic activity, acting on a rRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019446	BMT5-like	79	219
IPR019446	BMT5-like	20	53

External Links

No external refs found!

Spa_g05708

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation