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  5. Spa_g05740

Spa_g05740 (COI1)


Aliases : COI1

Description : component *(COI) of jasmonic acid receptor complex & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g05740

Target Alias Description ECC score Gene Family Method Actions
Ala_g11817 COI1 component *(COI) of jasmonic acid receptor complex &... 0.05 OrthoFinder output from all 47 species
Aop_g11731 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06540.t1 AFB2, Aspi01Gene06540 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Cba_g04056 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Cba_g22715 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.07 OrthoFinder output from all 47 species
Dac_g11136 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Dde_g01640 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ehy_g06397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003183001 TIR1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os04g32460.1 AFB2, LOC_Os04g32460 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
MA_10427099g0010 COI1 Coronatine-insensitive protein homolog 1b OS=Oryza... 0.02 OrthoFinder output from all 47 species
Ore_g26263 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ore_g29827 TIR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03902 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Sam_g19822 No alias component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Smo163526 COI1 Coronatine-insensitive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g20191 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Spa_g26581 COI1 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 102 147
IPR041567 COI1_F-box 43 81
No external refs found!