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  5. Spa_g06704

Spa_g06704


Description : ubiquitin adaptor protein *(TOL) & original description: none


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06704

Target Alias Description ECC score Gene Family Method Actions
AT5G16880 No alias Target of Myb protein 1 0.03 OrthoFinder output from all 47 species
Aev_g20194 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01215 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12622 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene53703.t1 Aspi01Gene53703 ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008766001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01022425001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01030233001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.05 OrthoFinder output from all 47 species
Gb_06800 No alias TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
LOC_Os06g22650.1 LOC_Os06g22650 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
LOC_Os11g09329.1 LOC_Os11g09329 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Nbi_g00825 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10875 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c23_19630V3.1 Pp3c23_19630 ENTH/VHS/GAT family protein 0.01 OrthoFinder output from all 47 species
Solyc03g097070.3.1 Solyc03g097070 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Solyc04g063280.3.1 Solyc04g063280 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Zm00001e015516_P001 Zm00001e015516 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
MF GO:0043130 ubiquitin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004152 GAT_dom 194 268
IPR002014 VHS_dom 3 112
No external refs found!