Spa_g06814


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06814

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aob_g30490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27252.t1 Aspi01Gene27252 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G087000.1 Ceric.01G087000 not classified & original description: pacid=50591063... 0.01 OrthoFinder output from all 47 species
Ceric.27G003000.1 Ceric.27G003000 not classified & original description: pacid=50605227... 0.02 OrthoFinder output from all 47 species
Ceric.38G028700.1 Ceric.38G028700 not classified & original description: pacid=50579312... 0.01 OrthoFinder output from all 47 species
Ore_g44046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014461 No alias not classified & original description: CDS=1-1647 0.02 OrthoFinder output from all 47 species
Spa_g11518 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g16454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 49 269
No external refs found!