Spa_g06827


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06827
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT3G49710 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g040937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g089158 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16177 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09609 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21473 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33111 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g35962 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g67878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68053 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29847 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.11G009800.1 Ceric.11G009800 not classified & original description: pacid=50594985... 0.05 OrthoFinder output from all 47 species
Ceric.16G050700.1 Ceric.16G050700 not classified & original description: pacid=50589143... 0.05 OrthoFinder output from all 47 species
Ceric.25G002100.1 Ceric.25G002100 not classified & original description: pacid=50593112... 0.05 OrthoFinder output from all 47 species
Ceric.34G057700.1 CRR2, Ceric.34G057700 not classified & original description: pacid=50623387... 0.04 OrthoFinder output from all 47 species
Dcu_g51593 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g07913 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g08650.1 LOC_Os06g08650 Pentatricopeptide repeat-containing protein At2g03380,... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Msp_g22299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04943 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15839 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g20613 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23595 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03998 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo107700 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 96 122
IPR002885 Pentatricopeptide_repeat 22 69
No external refs found!