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  5. Spa_g07048

Spa_g07048 (AtCRT1a, CRT1a, CRT1)


Aliases : AtCRT1a, CRT1a, CRT1

Description : ER luminal lectin chaperone *(CRT) & original description: none


Gene families : OG0000812 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07048

Target Alias Description ECC score Gene Family Method Actions
AT1G09210 CRT1b, AtCRT1b calreticulin 1b 0.02 OrthoFinder output from all 47 species
Adi_g084809 AtCRT3, EBS2, CRT3, PSL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g123209 AtCRT1a, CRT1a, CRT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g66471 AtCRT1a, CRT1a, CRT1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06184 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_07615 AtCRT1a, CRT1a, CRT1 lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species
Gb_34343 AtCRT1a, CRT1a, CRT1 lectin chaperone (CRT) 0.05 OrthoFinder output from all 47 species
LOC_Os07g14270.1 AtCRT1a, CRT1a,... lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species
Len_g17322 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43098 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.04 OrthoFinder output from all 47 species
Smo144212 CRT1b, AtCRT1b Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Smo89431 AtCRT1a, CRT1a, CRT1 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Solyc01g100380.4.1 AtCRT1a, CRT1a,... lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR001580 Calret/calnex 27 262
IPR001580 Calret/calnex 264 337
No external refs found!