Spa_g07084 (4CL3)


Aliases : 4CL3

Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07084

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00213640 4CL1, AT4CL1,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
AT1G51680 4CL1, AT4CL1, 4CL.1 4-coumarate:CoA ligase 1 0.13 OrthoFinder output from all 47 species
AT1G65060 4CL3 4-coumarate:CoA ligase 3 0.04 OrthoFinder output from all 47 species
AT3G21240 AT4CL2, 4CL2 4-coumarate:CoA ligase 2 0.02 OrthoFinder output from all 47 species
Adi_g058249 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Adi_g103472 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Adi_g115638 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Aev_g31792 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Als_g05666 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Aop_g17905 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.07 OrthoFinder output from all 47 species
Aop_g20826 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11403.t1 AT4CL2, 4CL2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46333.t1 4CL3, Aspi01Gene46333 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007625 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0114.g046013 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Cba_g05200 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Cba_g34238 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Cba_g41839 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G038600.1 4CL3, Ceric.12G038600 EC_6.2 ligase forming carbon-sulfur bond & original... 0.2 OrthoFinder output from all 47 species
Ceric.12G077900.1 4CL3, Ceric.12G077900 not classified & original description: pacid=50601305... 0.08 OrthoFinder output from all 47 species
Ceric.15G048400.1 4CL3, Ceric.15G048400 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.17G083800.1 AT4CL2, 4CL2,... EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.1Z155100.1 4CL3, Ceric.1Z155100 EC_6.2 ligase forming carbon-sulfur bond & original... 0.07 OrthoFinder output from all 47 species
Ceric.33G041000.1 ACOS5, Ceric.33G041000 acyl-CoA synthetase *(ACS5) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g07445 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Dac_g13992 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Dcu_g07017 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.08 OrthoFinder output from all 47 species
Dde_g24331 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.06 OrthoFinder output from all 47 species
Dde_g31145 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g16269 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g20793 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01010497001 ACOS5 Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase 0.03 OrthoFinder output from all 47 species
GSVIVT01024400001 4CL3 4-coumarate--CoA ligase 2 OS=Glycine max 0.03 OrthoFinder output from all 47 species
GSVIVT01029182001 4CL1, AT4CL1, 4CL.1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.06 OrthoFinder output from all 47 species
GSVIVT01029183001 AT4CL2, 4CL2 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum 0.16 OrthoFinder output from all 47 species
Gb_41091 4CL3 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
LOC_Os02g08100.1 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.12 OrthoFinder output from all 47 species
LOC_Os02g46970.1 4CL3, LOC_Os02g46970 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
LOC_Os04g24530.1 ACOS5, LOC_Os04g24530 acyl-CoA synthetase (ACS5) 0.02 OrthoFinder output from all 47 species
LOC_Os06g44620.1 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 OrthoFinder output from all 47 species
LOC_Os08g34790.1 AT4CL2, 4CL2,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
Len_g06460 4CL1, AT4CL1, 4CL.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20151 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Lfl_g06579 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Lfl_g15665 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
MA_8946476g0010 ACOS5 acyl-CoA synthetase (ACS5) 0.02 OrthoFinder output from all 47 species
Mp5g01200.1 4CL1, AT4CL1, 4CL.1 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
Nbi_g04314 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.07 OrthoFinder output from all 47 species
Ore_g10215 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g42310 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11346 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Pp3c8_730V3.1 ACOS5, Pp3c8_730 acyl-CoA synthetase 5 0.01 OrthoFinder output from all 47 species
Ppi_g08302 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42937 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006230 4CL3 not classified & original description: CDS=1-975 0.03 OrthoFinder output from all 47 species
Sam_g51306 No alias acyl-CoA synthetase *(ACS5) & original description: none 0.03 OrthoFinder output from all 47 species
Smo171251 AT4CL2, 4CL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 OrthoFinder output from all 47 species
Smo177393 AT4CL2, 4CL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 OrthoFinder output from all 47 species
Solyc03g097030.3.1 4CL3, Solyc03g097030 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
Solyc03g117870.3.1 AT4CL2, 4CL2,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
Solyc06g068650.4.1 AT4CL2, 4CL2,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
Solyc12g042460.2.1 AT4CL2, 4CL2,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.01 OrthoFinder output from all 47 species
Spa_g09896 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Spa_g47039 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07442 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Tin_g11239 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13836 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.1 OrthoFinder output from all 47 species
Zm00001e013798_P002 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.08 OrthoFinder output from all 47 species
Zm00001e022313_P002 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species
Zm00001e023286_P002 4CL3, Zm00001e023286 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
Zm00001e037698_P001 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 492 567
IPR000873 AMP-dep_Synth/Lig_com 67 483
No external refs found!