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  5. Spa_g07580

Spa_g07580 (AtRABA5a, RABA5a)


Aliases : AtRABA5a, RABA5a

Description : A-class RAB GTPase & original description: none


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07580

Target Alias Description ECC score Gene Family Method Actions
Aev_g09261 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03446 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g10560 ATRABA2A,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g42193 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010022 AtRABA1f, RABA1f A-class RAB GTPase & original description: CDS=217-867 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.97 AtRABA1e, RABA1e Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Gb_34717 ARA-1, ATRABA5E,... A-class RAB GTPase 0.06 OrthoFinder output from all 47 species
LOC_Os03g62600.1 ATRABA2A,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os09g15790.1 AtRABA1f,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Len_g57162 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g18286 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434967g0010 AtRABA1f, RABA1f A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
MA_129080g0010 RABA2b,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Mp3g00730.1 ATRABA5C, ARA4,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Nbi_g04633 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02178 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20558 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14805 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006210_P001 RABA2b,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 23 183
No external refs found!