Aliases : OTP84
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G56690 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G36980 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G33990 | EMB2758 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G35130 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g006593 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g019759 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g057625 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g058786 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g080720 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g083315 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g087265 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g087422 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18205 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g20304 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g34145 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g01931 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06589 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g31194 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g35880 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g36228 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36528 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03827 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04452 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g05671 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06397 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15487 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19242 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g27639 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30822 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g55125 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g08473 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g09923 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g26977 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27221 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g30453 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07700 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g09162 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g16806 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene24967.t1 | Aspi01Gene24967 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene35082.t1 | Aspi01Gene35082 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene68665.t1 | CRR22, Aspi01Gene68665 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0081.g038640 | OTP86 | not classified & original description: CDS=63-2522 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1334.g101644 | No alias | not classified & original description: CDS=1-3543 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s4317.g118724 | No alias | not classified & original description: CDS=1-465 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g03281 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g04659 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05286 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07170 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07323 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07412 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15323 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g22543 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g45673 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g67240 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g72888 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G107500.1 | Ceric.01G107500 | not classified & original description: pacid=50592273... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z081600.1 | CRR22, Ceric.1Z081600 | not classified & original description: pacid=50582216... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.21G030500.1 | Ceric.21G030500 | not classified & original description: pacid=50603713... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G038700.1 | Ceric.23G038700 | not classified & original description: pacid=50609782... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G047500.1 | Ceric.25G047500 | not classified & original description: pacid=50594463... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.28G026700.1 | Ceric.28G026700 | not classified & original description: pacid=50570188... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G069900.1 | Ceric.28G069900 | not classified & original description: pacid=50570610... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G017900.1 | Ceric.29G017900 | not classified & original description: pacid=50624370... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G024800.1 | Ceric.29G024800 | not classified & original description: pacid=50625545... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G033800.1 | Ceric.30G033800 | not classified & original description: pacid=50608836... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G044700.1 | Ceric.31G044700 | not classified & original description: pacid=50574022... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G052800.1 | Ceric.33G052800 | not classified & original description: pacid=50607149... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G045800.1 | VAC1, ECB2,... | not classified & original description: pacid=50583112... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g04509 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g05441 | RARE1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g20694 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g27114 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g33128 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35237 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08274 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16791 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17302 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g21216 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38414 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38590 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g50023 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g50838 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g22836 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12271 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13211 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g15996 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19361 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19509 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26389 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01003766001 | LPA66 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015461001 | ABCG40, PDR12,... | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g28570.1 | LOC_Os01g28570 | Pentatricopeptide repeat-containing protein At3g49710... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g60250.1 | LOC_Os01g60250 | Pentatricopeptide repeat-containing protein At3g14730... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g27790.1 | REME1, LOC_Os06g27790 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g46770.1 | LOC_Os07g46770 | Pentatricopeptide repeat-containing protein At4g21065... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g34720.1 | LOI1, MEF11,... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g03892 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12392 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03305 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06127 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06683 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07068 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g08759 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g15171 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g17373 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g36746 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g37802 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_27726g0010 | VAC1, ECB2, ATECB2 | RNA editing factor (ECB2/VAC1) | 0.03 | OrthoFinder output from all 47 species | |
| MA_482767g0010 | OTP84 | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g02751 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03121 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06933 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g08590 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g09439 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g10943 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g18759 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g27109 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28342 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g28793 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g41108 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g22117 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g12341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12795 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g03628 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05294 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06477 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0074.g017260 | No alias | not classified & original description: CDS=1-1968 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g02448 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g02933 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26236 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28767 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo109721 | No alias | Pentatricopeptide repeat-containing protein At3g63370,... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g15000 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g56457 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g04582 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06639 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08260 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10878 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g13381 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g15029 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16806 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g34283 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g35298 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e011923_P001 | Zm00001e011923 | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013713_P001 | Zm00001e013713 | Pentatricopeptide repeat-containing protein At4g20770... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 537 | 583 |
| IPR002885 | Pentatricopeptide_repeat | 138 | 186 |
| IPR002885 | Pentatricopeptide_repeat | 638 | 683 |
| IPR002885 | Pentatricopeptide_repeat | 338 | 385 |
| IPR002885 | Pentatricopeptide_repeat | 438 | 484 |
| IPR002885 | Pentatricopeptide_repeat | 312 | 337 |
| IPR002885 | Pentatricopeptide_repeat | 612 | 631 |
| IPR002885 | Pentatricopeptide_repeat | 110 | 136 |
| IPR002885 | Pentatricopeptide_repeat | 239 | 266 |
| No external refs found! |
