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  5. Spa_g07852

Spa_g07852 (ATHDA15, HDA15)


Aliases : ATHDA15, HDA15

Description : class-II histone deacetylase & original description: none


Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g07852

Target Alias Description ECC score Gene Family Method Actions
AT5G61060 ATHDA5, HDA05, HDA5 histone deacetylase 5 0.03 OrthoFinder output from all 47 species
Adi_g055256 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01049 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060221 ATHDA15, HDA15 class-II histone deacetylase & original description: CDS=93-1925 0.03 OrthoFinder output from all 47 species
Cba_g15038 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18820 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os07g06980.1 ATHDA15, HDA15,... class-II histone deacetylase 0.02 OrthoFinder output from all 47 species
Lfl_g05654 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g20110.1 ATHDA15, HDA15 class-II histone deacetylase 0.01 OrthoFinder output from all 47 species
Tin_g08286 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 218 506
No external refs found!