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  5. Spa_g08405

Spa_g08405 (YLS7, TBL17)


Aliases : YLS7, TBL17

Description : not classified & original description: none


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g08405
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00131340 ESK1, TBL29,... Cell wall.hemicellulose.xylan.modification and... 0.03 OrthoFinder output from all 47 species
Aev_g02218 TBL25 mannan O-acetyltransferase *(MOAT) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17846 TBL16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39858 TBL5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0056.g034193 TBL10 not classified & original description: CDS=52-624 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g034871 TBL25 not classified & original description: CDS=197-1354 0.03 OrthoFinder output from all 47 species
Cba_g19874 TBL2 polysaccharide O-acetyltransferase *(TBR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.35G011700.1 TBL11, Ceric.35G011700 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.02 OrthoFinder output from all 47 species
Dac_g07989 TBL14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08945 TBL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09058 TBL7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14902 YLS7, TBL17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19489 TBL5 polysaccharide O-acetyltransferase *(TBR) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01018511001 TBL18 Protein trichome birefringence-like 18 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032519001 TBL22 Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g02580.1 TBL12, LOC_Os02g02580 Protein trichome birefringence-like 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g16200.1 TBL20, LOC_Os06g16200 Protein trichome birefringence-like 20 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os12g33194.1 TBL16, LOC_Os12g33194 Protein trichome birefringence-like 16 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Len_g37817 TBL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436708g0010 TBL6 Protein trichome birefringence-like 6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc01g079400.3.1 TBL6, Solyc01g079400 Protein trichome birefringence-like 6 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Solyc07g053350.4.1 TBL39, Solyc07g053350 Protein trichome birefringence-like 39 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc09g015350.4.1 TBL34, Solyc09g015350 xylan O-acetyltransferase (XOAT) 0.02 OrthoFinder output from all 47 species
Solyc09g065030.3.1 TBL11, Solyc09g065030 rhamnogalacturonan-I O-acetyltransferase (TBL) 0.02 OrthoFinder output from all 47 species
Tin_g12300 TBL11 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.03 OrthoFinder output from all 47 species
Zm00001e036215_P001 TBR, Zm00001e036215 Protein trichome birefringence OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR025846 TBL_N 101 155
IPR026057 PC-Esterase 156 449
No external refs found!