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  5. Spa_g09045

Spa_g09045


Description : basal transcription factor *(TFIIb) & original description: none


Gene families : OG0001894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09045

Target Alias Description ECC score Gene Family Method Actions
Ehy_g21700 No alias basal transcription factor *(TFIIb) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01872 No alias basal transcription factor *(TFIIb) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0017025 TBP-class protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005262 calcium channel activity IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0070588 calcium ion transmembrane transport IEP HCCA
BP GO:0097553 calcium ion transmembrane import into cytosol IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098657 import into cell IEP HCCA
BP GO:0098659 inorganic cation import across plasma membrane IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:0098703 calcium ion import across plasma membrane IEP HCCA
BP GO:0098739 import across plasma membrane IEP HCCA
BP GO:0099587 inorganic ion import across plasma membrane IEP HCCA
InterPro domains Description Start Stop
IPR013150 TFIIB_cyclin 207 292
IPR013150 TFIIB_cyclin 104 187
IPR013137 Znf_TFIIB 8 50
No external refs found!