Aliases : XRN3, AtXRN3
Description : exoribonuclease *(RAT1/XRN2) & original description: none
Gene families : OG0000769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000769_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g09288 | |
| Cluster | HCCA: Cluster_56 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aob_g11344 | XRN3, AtXRN3 | exoribonuclease *(RAT1/XRN2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g68931 | XRN3, AtXRN3 | exoribonuclease *(RAT1/XRN2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g24148 | EIN5, AIN1, XRN4, ATXRN4 | exoribonuclease *(XRN4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G061100.1 | EIN5, AIN1,... | exoribonuclease *(XRN4) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cre16.g679900 | XRN3, AtXRN3 | 5-3 exoribonuclease 3 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g10054 | XRN3, AtXRN3 | exoribonuclease *(RAT1/XRN2) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01021865001 | EIN5, AIN1, XRN4, ATXRN4 | RNA processing.RNA decay.deadenylation-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g34614 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g08820.1 | XRN3, AtXRN3 | exoribonuclease (RAT1/XRN2) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g13698 | XRN3, AtXRN3 | exoribonuclease *(RAT1/XRN2) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g01285 | XRN3, AtXRN3 | exoribonuclease *(RAT1/XRN2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g10345 | XRN3, AtXRN3 | exoribonuclease *(XRN4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017277_P001 | XRN3, AtXRN3,... | exoribonuclease (RAT1/XRN2) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0004527 | exonuclease activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0042393 | histone binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| No external refs found! |
