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  5. Spa_g09841

Spa_g09841


Description : not classified & original description: none


Gene families : OG0001159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09841
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00048530 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G28420 No alias Lactoylglutathione lyase / glyoxalase I family protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene71508.t1 Aspi01Gene71508 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015508001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01023260001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_18731 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10428538g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10429874g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_193904g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_389831g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_814986g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9005842g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_9349606g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9550254g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g03980.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g03369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41006 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g47670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g116530.3.1 Solyc03g116530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g006640.2.1 Solyc12g006640 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g10613 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e026712_P002 Zm00001e026712 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e031188_P001 Zm00001e031188 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004360 Glyas_Fos-R_dOase_dom 45 165
No external refs found!