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  5. Spa_g10247

Spa_g10247


Description : non-SNARE-type phytolongin & original description: none


Gene families : OG0001363 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001363_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g10247
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00108030 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Ala_g14987 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25521 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Als_g21939 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01564 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03738 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14564 No alias non-SNARE-type phytolongin & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene47691.t1 Aspi01Gene47691 non-SNARE-type phytolongin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene66627.t1 Aspi01Gene66627 non-SNARE-type phytolongin & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29996 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G025100.1 Ceric.05G025100 non-SNARE-type phytolongin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G046400.1 Ceric.37G046400 non-SNARE-type phytolongin & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g11570 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44291 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03533 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15032 No alias non-SNARE-type phytolongin & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os08g01880.1 LOC_Os08g01880 non-SNARE-type phytolongin 0.04 OrthoFinder output from all 47 species
Len_g14095 No alias non-SNARE-type phytolongin & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g07277 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04173 No alias non-SNARE-type phytolongin & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g23619 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17416 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016301 No alias not classified & original description: CDS=1-1044 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022381 No alias non-SNARE-type phytolongin & original description: CDS=1-828 0.04 OrthoFinder output from all 47 species
Tin_g12588 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029159_P001 Zm00001e029159 non-SNARE-type phytolongin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 35 95
No external refs found!