Spa_g10311 (CPN60B, LEN1)

Aliases : CPN60B, LEN1

Description : not classified & original description: none

Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g10311
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AT1G55490	CPN60B, LEN1	chaperonin 60 beta	0.03	OrthoFinder output from all 47 species
Adi_g114645	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g10927	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.01G061000.1	CH-CPN60A,...	chaperone *(Hsp60) & original description:...	0.05	OrthoFinder output from all 47 species
Cre04.g231222	CH-CPN60A, CPN60A, SLP	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Dcu_g08596	CPN60B, LEN1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01017032001	No alias	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
GSVIVT01025490001	No alias	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
MA_587689g0010	CH-CPN60A, CPN60A, SLP	RuBisCO large subunit-binding protein subunit alpha...	0.03	OrthoFinder output from all 47 species
MA_97627g0010	No alias	Chaperonin 60 subunit beta 2, chloroplastic...	0.03	OrthoFinder output from all 47 species
Mp1g21640.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.04	OrthoFinder output from all 47 species
Mp5g20470.1	CH-CPN60A, CPN60A, SLP	subunit alpha of Cpn60 chaperonin complex. component...	0.05	OrthoFinder output from all 47 species
Nbi_g30013	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g12248	No alias	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Smo165043	No alias	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
Solyc01g028810.3.1	Solyc01g028810	subunit beta of Cpn60 chaperonin complex. component...	0.03	OrthoFinder output from all 47 species
Tin_g27931	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e025409_P001	Zm00001e025409	subunit beta of Cpn60 chaperonin complex. component...	0.03	OrthoFinder output from all 47 species
Zm00001e029825_P001	CPN60B, LEN1,...	subunit beta of Cpn60 chaperonin complex. component...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	86	347

External Links

No external refs found!

Spa_g10311 (CPN60B, LEN1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation