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  5. Spa_g11483

Spa_g11483


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g11483

Target Alias Description ECC score Gene Family Method Actions
AT2G36710 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G19730 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G26810 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g47599 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22635 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02507 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04456 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g07992 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16751 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20021 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20106 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g20602 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21986 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g22415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g56742 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30602.t1 Aspi01Gene30602 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70538.t1 Aspi01Gene70538 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0040.g026602 No alias pectin methylesterase & original description: CDS=187-1626 0.05 OrthoFinder output from all 47 species
Cba_g05738 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.29G054600.1 Ceric.29G054600 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.37G019000.1 Ceric.37G019000 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g00830 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11820 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g15161 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g17627 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06266 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11350 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11729 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42904 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44261 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g02282 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07516 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23283 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09832 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428610g0010 No alias pectin methylesterase 0.05 OrthoFinder output from all 47 species
MA_14449g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_19196g0010 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_304854g0010 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp2g19430.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Msp_g39582 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42451 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03614 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08012 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27443 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26065 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02205 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c12_24000V3.1 Pp3c12_24000 Pectin lyase-like superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g11138 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24799 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004950 No alias pectin methylesterase & original description: CDS=716-1846 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020122 No alias not classified & original description: CDS=269-877 0.03 OrthoFinder output from all 47 species
Sam_g02095 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12543 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g075620.4.1 Solyc02g075620 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Spa_g10100 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49902 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54581 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10437 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19866 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35486 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029074_P001 Zm00001e029074 pectin methylesterase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 107 379
No external refs found!