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  5. Spa_g11537

Spa_g11537


Description : component *(eL19) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g11537

Target Alias Description ECC score Gene Family Method Actions
Adi_g087959 emb2386 component *(eL19) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g03394 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009570 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Azfi_s0627.g079994 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.07G087100.1 Ceric.07G087100 component *(eL19) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.17G056200.1 Ceric.17G056200 component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021181.1 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre02.g075700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Ehy_g08169 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01035096001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_23172 No alias component RPL19 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os03g21940.1 emb2386, LOC_Os03g21940 component RPL19 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os03g38260.1 LOC_Os03g38260 component RPL19 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Len_g07146 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_1839g0010 emb2386 component RPL19 of LSU proteome component 0.04 OrthoFinder output from all 47 species
MA_22977g0010 emb2386 component RPL19 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp7g09050.1 No alias component RPL19 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Msp_g18967 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pp3c16_410V3.1 Pp3c16_410 Ribosomal protein L19e family protein 0.02 OrthoFinder output from all 47 species
Pp3c21_11230V3.1 Pp3c21_11230 Ribosomal protein L19e family protein 0.02 OrthoFinder output from all 47 species
Pp3c22_9980V3.1 Pp3c22_9980 Ribosomal protein L19e family protein 0.02 OrthoFinder output from all 47 species
Pp3c9_14720V3.1 Pp3c9_14720 Ribosomal protein L19e family protein 0.02 OrthoFinder output from all 47 species
Ppi_g28399 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001949 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo179747 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc06g009210.4.1 emb2386, Solyc06g009210 component RPL19 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Solyc09g075430.3.1 Solyc09g075430 component RPL19 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Spa_g11535 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g11536 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Tin_g03158 No alias component *(eL19) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e013683_P001 emb2386, Zm00001e013683 component RPL19 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 4 145
No external refs found!