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  5. Spa_g12214

Spa_g12214


Description : ROP-activating protein *(RopGAP) & original description: none


Gene families : OG0000915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00129680 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
AT4G03100 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.03 OrthoFinder output from all 47 species
Aop_g25450 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05177.t2 Aspi01Gene05177 ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21330.t2 Aspi01Gene21330 ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g22580.1 LOC_Os07g22580 ROP-activating protein (RopGAP) 0.05 OrthoFinder output from all 47 species
LOC_Os11g05540.1 LOC_Os11g05540 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
LOC_Os12g34840.1 LOC_Os12g34840 ROP-activating protein (RopGAP) 0.04 OrthoFinder output from all 47 species
Lfl_g17464 No alias ROP-activating protein *(RopGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002103 No alias ROP-activating protein *(RopGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012358 No alias ROP-activating protein *(RopGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Solyc06g084450.4.1 Solyc06g084450 ROP-activating protein (RopGAP) 0.04 OrthoFinder output from all 47 species
Solyc09g074340.3.1 Solyc09g074340 ROP-activating protein (RopGAP) 0.04 OrthoFinder output from all 47 species
Zm00001e018302_P003 Zm00001e018302 ROP-activating protein (RopGAP) 0.05 OrthoFinder output from all 47 species
Zm00001e033341_P001 Zm00001e033341 ROP-activating protein (RopGAP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000095 CRIB_dom 172 199
IPR000198 RhoGAP_dom 235 369
No external refs found!