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  5. Spa_g12649

Spa_g12649


Description : not classified & original description: none


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12649
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AT1G01570 No alias Protein of unknown function (DUF604) 0.01 OrthoFinder output from all 47 species
AT5G12460 No alias Protein of unknown function (DUF604) 0.03 OrthoFinder output from all 47 species
Adi_g056686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g16575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35672.t1 Aspi01Gene35672 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g015970 No alias not classified & original description: CDS=592-2169 0.03 OrthoFinder output from all 47 species
Cba_g07895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g62338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G053300.1 Ceric.03G053300 not classified & original description: pacid=50572689... 0.03 OrthoFinder output from all 47 species
Dac_g02802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025084001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_04360 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_36870 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_39624 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os02g31210.1 LOC_Os02g31210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g16290.1 LOC_Os03g16290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g34254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_12294g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_2039838g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7477879g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_89971g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g44317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo63103 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc07g052650.2.1 Solyc07g052650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g011090.3.1 Solyc09g011090 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc11g065470.2.1 Solyc11g065470 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g099680.1.1 Solyc12g099680 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g099730.3.1 Solyc12g099730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g56742 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 227 483
No external refs found!