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  5. Spa_g12886

Spa_g12886


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000191 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000191_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12886
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT1G30080 No alias Glycosyl hydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G18340 No alias Glycosyl hydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g26106 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Als_g09035 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Als_g16035 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20068 No alias EC_3.2 glycosylase & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene05197.t1 Aspi01Gene05197 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07465 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G041300.1 Ceric.03G041300 EC_3.2 glycosylase & original description:... 0.14 OrthoFinder output from all 47 species
Ceric.21G010800.1 Ceric.21G010800 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.31G047300.1 Ceric.31G047300 EC_3.2 glycosylase & original description:... 0.11 OrthoFinder output from all 47 species
Ceric.32G018300.1 Ceric.32G018300 EC_3.2 glycosylase & original description:... 0.15 OrthoFinder output from all 47 species
Dcu_g04711 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02460 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009700001 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01013401001 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017331001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
GSVIVT01036124001 No alias Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g10660.1 LOC_Os02g10660 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
LOC_Os03g46660.1 LOC_Os03g46660 Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g51240.2 LOC_Os03g51240 Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g01841 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Len_g18268 No alias EC_3.2 glycosylase & original description: none 0.15 OrthoFinder output from all 47 species
Len_g50431 No alias EC_3.2 glycosylase & original description: none 0.13 OrthoFinder output from all 47 species
Mp7g16830.1 No alias Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g05697 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g07582 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38665 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g00918 No alias EC_3.2 glycosylase & original description: none 0.26 OrthoFinder output from all 47 species
Nbi_g02971 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08720 No alias EC_3.2 glycosylase & original description: none 0.23 OrthoFinder output from all 47 species
Nbi_g17976 No alias EC_3.2 glycosylase & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g11617 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27078 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g62202 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g64036 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0114.g020922 No alias EC_3.2 glycosylase & original description: CDS=1-1173 0.02 OrthoFinder output from all 47 species
Solyc04g080260.4.1 Solyc04g080260 Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g054440.4.1 Solyc05g054440 Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.02 OrthoFinder output from all 47 species
Solyc07g008150.3.1 Solyc07g008150 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Solyc11g071520.2.1 Solyc11g071520 Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Tin_g15071 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e014030_P001 Zm00001e014030 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 411 482
IPR000490 Glyco_hydro_17 52 368
No external refs found!