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  5. Spa_g13067

Spa_g13067


Description : LRR-domain extensin & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g13067

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
Adi_g080109 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085610 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36649 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10583 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13705 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03958.t1 LRX2, Aspi01Gene03958 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28758.t1 Aspi01Gene28758 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03151 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11931 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g13236 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01171 LRX1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04566 LRX2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18799 LRX2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018025001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01031700001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_12380 No alias LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os01g08470.1 LOC_Os01g08470 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os02g04540.1 LRX1, LOC_Os02g04540 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os02g40260.1 LOC_Os02g40260 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Lfl_g17909 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
Msp_g29675 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018499 No alias LRR-domain extensin & original description: CDS=1-1542 0.04 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
Solyc01g107790.2.1 Solyc01g107790 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g078560.1.1 Solyc04g078560 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Spa_g33020 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011874_P001 Zm00001e011874 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e026840_P001 Zm00001e026840 LRR-domain extensin 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 93 129
IPR001611 Leu-rich_rpt 310 367
No external refs found!