1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g13342

Spa_g13342


Description : not classified & original description: none


Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g13342
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Adi_g005717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g65247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03556.t1 Aspi01Gene03556 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09121.t1 Aspi01Gene09121 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16489.t1 CRCK1, Aspi01Gene16489 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25751.t1 ORF120, Aspi01Gene25751 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37633.t1 Aspi01Gene37633 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44452.t1 Aspi01Gene44452 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene46271.t1 Aspi01Gene46271 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50578.t1 Aspi01Gene50578 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51356.t1 Aspi01Gene51356 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72777.t1 Aspi01Gene72777 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g42054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19135 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00434 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_13962 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_26132 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_40384 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g12495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45324 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g11945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g40706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33365 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17603 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g16944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26822 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 7 59
IPR001584 Integrase_cat-core 76 161
No external refs found!