Aliases : EDT1, HDG11, ATHDG11
Description : HD-ZIP IV-type transcription factor & original description: none
Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g14140 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g27191 | PDF2 | HD-ZIP IV-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g65620 | ATML1 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g20878 | HDG2 | HD-ZIP IV-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_93471g0010 | ANL2, AHDP | transcription factor (HD-ZIP IV) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g080260.4.1 | PDF2, Solyc02g080260 | transcription factor (HD-ZIP IV) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041435_P003 | HDG1, HD-GL2-1,... | transcription factor (HD-ZIP IV) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| MF | GO:0003968 | RNA-dependent RNA polymerase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0007275 | multicellular organism development | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| CC | GO:0008303 | caspase complex | IEP | HCCA |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0016255 | attachment of GPI anchor to protein | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
| BP | GO:0032502 | developmental process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| CC | GO:0042765 | GPI-anchor transamidase complex | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0048856 | anatomical structure development | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| BP | GO:0072488 | ammonium transmembrane transport | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| CC | GO:1905368 | peptidase complex | IEP | HCCA |
| CC | GO:1905369 | endopeptidase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001356 | Homeobox_dom | 124 | 178 |
| No external refs found! |
