Spa_g15016


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g15016

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00195340 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
AT3G46790 CRR2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11263 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g07887 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16840 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17265 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g19914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25197 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g31193 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36208 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g36212 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38788 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g39105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05079 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05671 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15655 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19077 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26442 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g57762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40645 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03404 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06679 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g26538 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g35962 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aop_g68088 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene72589.t1 MEF22, Aspi01Gene72589 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07649 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20347 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20433 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35670 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g42745 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43165 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11730 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12053 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29034 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01013023001 No alias Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species
GSVIVT01032721001 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.04 OrthoFinder output from all 47 species
LOC_Os03g13830.1 LOC_Os03g13830 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.08 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os10g40920.1 LOC_Os10g40920 RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species
Len_g03387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08835 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g17363 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g23907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44806 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g06003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g02461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17589 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g35189 OTP84 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Msp_g35356 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41100 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g48633 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06586 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08417 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14034 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g15290 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09990 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16678 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20288 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04335 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04611 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g05733 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07362 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08859 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g11016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13349 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45723 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g53393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g068810.4.1 Solyc06g068810 Pentatricopeptide repeat-containing protein At5g50990... 0.06 OrthoFinder output from all 47 species
Spa_g17686 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20273 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21545 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26356 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g28117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45669 CRR22 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g53704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54636 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g23004 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25577 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26996 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g27779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR046848 E_motif 140 194
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 89 120
No external refs found!