Spa_g15017 (REME1)


Aliases : REME1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g15017
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00252800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
AT4G16470 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g001575 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g007662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g012996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.09 OrthoFinder output from all 47 species
Als_g26377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27009 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g27294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37596 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33564 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s3759.g116773 CRR2 not classified & original description: CDS=1-1509 0.06 OrthoFinder output from all 47 species
Cba_g05760 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G067400.1 Ceric.11G067400 not classified & original description: pacid=50595438... 0.07 OrthoFinder output from all 47 species
Ceric.13G013300.1 Ceric.13G013300 not classified & original description: pacid=50635860... 0.04 OrthoFinder output from all 47 species
Ceric.14G064000.1 Ceric.14G064000 not classified & original description: pacid=50634231... 0.05 OrthoFinder output from all 47 species
Ceric.14G094700.1 EMB2758, Ceric.14G094700 not classified & original description: pacid=50634278... 0.06 OrthoFinder output from all 47 species
Ceric.16G047600.1 Ceric.16G047600 not classified & original description: pacid=50589369... 0.05 OrthoFinder output from all 47 species
Ceric.22G034400.1 Ceric.22G034400 not classified & original description: pacid=50613809... 0.05 OrthoFinder output from all 47 species
Ceric.25G017200.1 VAC1, ECB2,... not classified & original description: pacid=50594284... 0.04 OrthoFinder output from all 47 species
Ceric.28G015300.1 Ceric.28G015300 not classified & original description: pacid=50570535... 0.06 OrthoFinder output from all 47 species
Dac_g12406 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42745 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12070 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17164 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26576 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50116 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04371 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24873 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20556 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g21008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23070 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_475393g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Msp_g26081 MEF9 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41407 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g42801 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g45902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08399 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g23628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25096 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g27847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32359 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13023 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57929 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04545 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12889 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15474 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15681 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g15700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30635 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07564 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g40990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001817 No alias not classified & original description: CDS=1-3483 0.04 OrthoFinder output from all 47 species
Sam_g16146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo172234 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.03 OrthoFinder output from all 47 species
Solyc03g096610.2.1 Solyc03g096610 Pentatricopeptide repeat-containing protein At1g33350... 0.04 OrthoFinder output from all 47 species
Solyc07g062820.1.1 Solyc07g062820 RNA editing factor (SEL1/PDM1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 12 58
IPR046848 E_motif 130 184
IPR002885 Pentatricopeptide_repeat 86 114
No external refs found!