Spa_g15050


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g15050

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.05 OrthoFinder output from all 47 species
Adi_g004372 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036755 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068879 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g069066 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g098232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117068 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27648 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11484 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13294 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16432 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22271 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24374 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33237 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36543 CRR22 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g05112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18943 CRR21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26222 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54909 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54924 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05250 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16489 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16811 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25536 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28388 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33365 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g36004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14838.t1 Aspi01Gene14838 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71861.t1 CRR2, Aspi01Gene71861 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0020.g015372 OTP86 not classified & original description: CDS=1-2592 0.06 OrthoFinder output from all 47 species
Azfi_s0134.g049386 No alias not classified & original description: CDS=1-2409 0.06 OrthoFinder output from all 47 species
Cba_g04668 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06933 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20476 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29864 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G038000.1 Ceric.04G038000 not classified & original description: pacid=50632532... 0.05 OrthoFinder output from all 47 species
Ceric.10G031500.1 OTP84, Ceric.10G031500 not classified & original description: pacid=50611993... 0.04 OrthoFinder output from all 47 species
Ceric.12G018600.1 Ceric.12G018600 not classified & original description: pacid=50602205... 0.05 OrthoFinder output from all 47 species
Ceric.15G015100.1 CRR22, Ceric.15G015100 not classified & original description: pacid=50640379... 0.03 OrthoFinder output from all 47 species
Ceric.23G076700.1 OTP84, Ceric.23G076700 not classified & original description: pacid=50610256... 0.06 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.04 OrthoFinder output from all 47 species
Ceric.26G013000.1 Ceric.26G013000 not classified & original description: pacid=50600010... 0.05 OrthoFinder output from all 47 species
Ceric.30G071500.1 Ceric.30G071500 not classified & original description: pacid=50609206... 0.05 OrthoFinder output from all 47 species
Dcu_g40681 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g02296 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50757 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_02573 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Gb_32256 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g60000.1 SLO1, LOC_Os01g60000 Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g52475.1 LOC_Os03g52475 Pentatricopeptide repeat-containing protein At3g28660... 0.03 OrthoFinder output from all 47 species
LOC_Os11g01836.1 LOC_Os11g01836 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g18456 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57720 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07048 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17712 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23173 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33669 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g36055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38043 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38509 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43763 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05383 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g16047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20412 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24057 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g51106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g13037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16487 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g084830.4.1 Solyc02g084830 Pentatricopeptide repeat-containing protein At5g44230... 0.03 OrthoFinder output from all 47 species
Solyc03g025700.2.1 Solyc03g025700 OTP70 plastidial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Solyc04g079410.3.1 Solyc04g079410 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Spa_g25363 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30407 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g56147 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.02 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
Zm00001e016281_P001 LPA66, Zm00001e016281 Pentatricopeptide repeat-containing protein At3g62890... 0.03 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.03 OrthoFinder output from all 47 species
Zm00001e031351_P001 EMB2261, Zm00001e031351 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
Zm00001e032581_P001 Zm00001e032581 RNA editing factor (BLX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 295 317
IPR002885 Pentatricopeptide_repeat 220 265
IPR002885 Pentatricopeptide_repeat 321 367
No external refs found!