Spa_g15096

Description : not classified & original description: none

Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g15096

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene09773.t1	Aspi01Gene09773	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g11528	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Mp7g19060.1	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Pnu_g06087	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g12741	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g016770.3.1	Solyc06g016770	RING-v-class E3 ligase	0.03	OrthoFinder output from all 47 species
Zm00001e014864_P002	Zm00001e014864	RING-v-class E3 ligase	0.02	OrthoFinder output from all 47 species
Zm00001e040499_P001	Zm00001e040499	RING-v-class E3 ligase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	166	216

External Links

No external refs found!