Spa_g16263 (ATCSP2, GRP2, CSDP2, CSP2)

Aliases : ATCSP2, GRP2, CSDP2, CSP2

Description : cold-responsive mRNA chaperone *(CSD) & original description: none

Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g16263
Cluster	HCCA: Cluster_187

Target	Alias	Description	ECC score	Gene Family Method
AT2G17870	ATCSP3, CSP3	cold shock domain protein 3	0.03	OrthoFinder output from all 47 species
Adi_g102537	ATCSP2, GRP2, CSDP2, CSP2	cold-responsive mRNA chaperone *(CSD) & original...	0.03	OrthoFinder output from all 47 species
Nbi_g02715	ATCSP2, GRP2, CSDP2, CSP2	cold-responsive mRNA chaperone *(CSD) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g05853	ATCSP2, GRP2, CSDP2, CSP2	cold-responsive mRNA chaperone *(CSD) & original...	0.03	OrthoFinder output from all 47 species
Sam_g43520	No alias	cold-responsive mRNA chaperone *(CSD) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002059	CSP_DNA-bd	1	63
IPR001878	Znf_CCHC	149	164
IPR001878	Znf_CCHC	119	134

External Links

No external refs found!