Spa_g16329


Description : MYB-RELATED transcription factor *(MYB-R-R) & original description: none


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16329

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00022290 evm_27.TU.AmTr_v1... Transcription factor SRM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G47390 No alias myb-like transcription factor family protein 0.02 OrthoFinder output from all 47 species
Adi_g044840 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.05 OrthoFinder output from all 47 species
Adi_g075107 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Als_g20732 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Als_g39083 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Als_g49186 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Als_g57625 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene17157.t2 Aspi01Gene17157 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene17161.t1 Aspi01Gene17161 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0034.g025309 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Cba_g08737 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Cba_g13916 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os01g09640.1 LOC_Os01g09640 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
LOC_Os01g63460.1 LOC_Os01g63460 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
LOC_Os05g10690.1 LOC_Os05g10690 transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
LOC_Os05g37060.1 LOC_Os05g37060 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
LOC_Os05g37730.1 LOC_Os05g37730 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Lfl_g05441 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g00718 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g09664 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Pir_g28250 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g22164 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Sam_g10636 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g113620.3.1 Solyc03g113620 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Solyc04g008870.3.1 Solyc04g008870 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Solyc05g052610.3.1 Solyc05g052610 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Spa_g21184 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Tin_g12116 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e002313_P001 Zm00001e002313 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e017388_P001 Zm00001e017388 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e019254_P001 Zm00001e019254 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e025784_P001 Zm00001e025784 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e042486_P001 Zm00001e042486 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 42 87
IPR001005 SANT/Myb 165 208
No external refs found!