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  5. Spa_g16342

Spa_g16342


Description : 2S globulin seed storage protein & original description: none


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16342
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00192080 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00192280 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.04 OrthoFinder output from all 47 species
Adi_g024828 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12959 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68852.t1 Aspi01Gene68852 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Len_g46226 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06939 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15826 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45288 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g39730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13030 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021725 No alias 2S globulin seed storage protein & original description:... 0.02 OrthoFinder output from all 47 species
Solyc11g072760.1.1 Solyc11g072760 no description available(sp|q7m443|chit2_tulsb : 364.0) 0.03 OrthoFinder output from all 47 species
Spa_g05409 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46052 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004771_P001 Zm00001e004771 no description available(sp|q7m443|chit2_tulsb : 319.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 82 227
No external refs found!