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  5. Spa_g16912

Spa_g16912 (MBD05, MBD5, ATMBD5)


Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16912
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Ala_g09047 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09576 No alias methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07042 MBD05, MBD5, ATMBD5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06705 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024953001 No alias No description available 0.02 OrthoFinder output from all 47 species
Mp2g13260.1 MBD05, MBD5, ATMBD5 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g22182 ATMBD6, MBD6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55639 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016853 isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 362 417
No external refs found!