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  5. Spa_g16972

Spa_g16972


Description : UMF23-type solute transporter & original description: none


Gene families : OG0000069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16972
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00061170 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00077p00034390 evm_27.TU.AmTr_v1... Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G80530 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G16660 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G34950 No alias Major facilitator superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G14120 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g21634 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08140 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49029 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13265 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26880 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G016400.1 Ceric.03G016400 UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G002500.1 Ceric.31G002500 UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G046300.1 Ceric.33G046300 UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g22014 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25303 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43445 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01425 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008083001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01016196001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g31924.1 LOC_Os04g31924 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
LOC_Os04g42420.1 LOC_Os04g42420 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
LOC_Os12g29950.1 LOC_Os12g29950 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_10099391g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_2615g0010 No alias anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
MA_6723g0010 No alias anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
MA_8442580g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9061214g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Ore_g28611 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17226 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13933 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19594 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28803 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g111350.3.1 Solyc01g111350 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Solyc06g011590.3.1 Solyc06g011590 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
Solyc09g008370.1.1 Solyc09g008370 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
Solyc10g083940.1.1 Solyc10g083940 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Spa_g11114 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52118 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26859 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g40087 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006027_P001 Zm00001e006027 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Zm00001e011367_P001 Zm00001e011367 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Zm00001e040754_P003 Zm00001e040754 anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR010658 Nodulin-like 16 254
No external refs found!