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  5. Spa_g17016

Spa_g17016


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17016

Target Alias Description ECC score Gene Family Method Actions
AT4G12040 No alias A20/AN1-like zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g015497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g41232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43423 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08393.t1 Aspi01Gene08393 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26592.t1 Aspi01Gene26592 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G076000.1 Ceric.15G076000 not classified & original description: pacid=50640210... 0.03 OrthoFinder output from all 47 species
Ceric.1Z062000.1 Ceric.1Z062000 not classified & original description: pacid=50604721... 0.02 OrthoFinder output from all 47 species
Ceric.35G033600.1 Ceric.35G033600 not classified & original description: pacid=50581057... 0.03 OrthoFinder output from all 47 species
Dac_g09022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37592 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019930001 No alias Zinc finger A20 and AN1 domain-containing... 0.05 OrthoFinder output from all 47 species
LOC_Os02g32840.1 LOC_Os02g32840 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os05g23470.1 LOC_Os05g23470 Zinc finger AN1 domain-containing stress-associated... 0.02 OrthoFinder output from all 47 species
Len_g21159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34382 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g34933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g49412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59335 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g02920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003512_P001 Zm00001e003512 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002653 Znf_A20 23 46
IPR000058 Znf_AN1 99 136
No external refs found!