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  5. Spa_g17144

Spa_g17144


Description : not classified & original description: none


Gene families : OG0001166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17144
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00168070 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G25460 No alias CONTAINS InterPro DOMAIN/s: C2 calcium-dependent... 0.08 OrthoFinder output from all 47 species
Adi_g056920 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05316 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35855 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G049000.1 Ceric.12G049000 not classified & original description: pacid=50602417... 0.05 OrthoFinder output from all 47 species
Ceric.38G036200.1 Ceric.38G036200 not classified & original description: pacid=50579469... 0.03 OrthoFinder output from all 47 species
Dac_g08103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04088 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g28805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016350001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01035860001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_30870 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g18918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp7g19530.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g06883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002651 No alias not classified & original description: CDS=459-2660 0.03 OrthoFinder output from all 47 species
Solyc08g059710.4.1 Solyc08g059710 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g38308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005259_P001 Zm00001e005259 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025940_P001 Zm00001e025940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 18 169
No external refs found!