Spa_g17575


Description : not classified & original description: none


Gene families : OG0002397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002397_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17575
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
Ala_g37949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G055100.1 PMZ, SAP12,... not classified & original description: pacid=50618072... 0.05 OrthoFinder output from all 47 species
Ehy_g00576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_16838 No alias C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Len_g47771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g087210.3.1 PMZ, SAP12,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e035296_P001 Zm00001e035296 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 13 51
IPR000058 Znf_AN1 101 139
No external refs found!