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  4. Sequence
  5. Spa_g20086

Spa_g20086


Description : not classified & original description: none


Gene families : OG0000423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000423_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g20086

Target Alias Description ECC score Gene Family Method Actions
Aev_g09132 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g01470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40762.t1 Aspi01Gene40762 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42763.t1 Aspi01Gene42763 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0250.g060242 No alias not classified & original description: CDS=1-996 0.06 OrthoFinder output from all 47 species
Cba_g21254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g00689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36563 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08089 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05776 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01021840001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01030131001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g00419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_100150g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10150752g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_122006g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_139217g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02233 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g05255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05762 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g11205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g097830.2.1 Solyc01g097830 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g41879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008586 DUF868_pln 91 302
No external refs found!