Spa_g20260


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g20260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270380 OTP86,... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Ala_g10918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ala_g13621 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16632 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g17235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36208 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g36223 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16322 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23758 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23988 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25532 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33564 MEF19 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g68078 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g70480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20899 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g24762 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28223 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06332 CRR2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g07356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08500 VAC1, ECB2, ATECB2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g16950 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g22670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12683 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_123466g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_17949g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_20622g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_34492g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_34492g0020 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_9526611g0020 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Msp_g17746 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g04969 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05484 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06656 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16042 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g19047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03324 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004386 No alias not classified & original description: CDS=1-2367 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0215.g026034 OTP84 not classified & original description: CDS=2081-4369 0.02 OrthoFinder output from all 47 species
Smo80412 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Smo94780 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Spa_g10760 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14568 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g18928 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53273 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05956 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g07744 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 20 44
IPR002885 Pentatricopeptide_repeat 122 144
IPR002885 Pentatricopeptide_repeat 148 187
IPR002885 Pentatricopeptide_repeat 46 92
No external refs found!