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  5. Spa_g21634

Spa_g21634 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g21634

Target Alias Description ECC score Gene Family Method Actions
Adi_g004528 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013701 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g033552 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049631 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104337 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g11263 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19914 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21583 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02900 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02901 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03801 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04440 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12052 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13263 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g14349 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g14571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16784 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17445 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23576 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23788 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23952 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g23962 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25531 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28392 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g28403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28692 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28699 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g30400 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30470 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g31313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31401 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g31824 VAC1, ECB2, ATECB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g33010 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33219 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g33229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33367 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33592 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37414 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g51258 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g61512 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67754 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g67864 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68092 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15988.t1 Aspi01Gene15988 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34758.t1 Aspi01Gene34758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023505 No alias not classified & original description: CDS=32-2620 0.05 OrthoFinder output from all 47 species
Cba_g20428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67745 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g03843 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g03846 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g04705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09382 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g09743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18416 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18536 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19052 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g19094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20899 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23537 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g25258 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g25289 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g27646 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30164 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g44492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25754 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26019 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29034 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Len_g10356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g23154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32904 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g39660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04404 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g14918 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g30376 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33835 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34496 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g37650 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46118 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47222 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g10308 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43227 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63647 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g64857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10326 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g13349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g068810.4.1 Solyc06g068810 Pentatricopeptide repeat-containing protein At5g50990... 0.03 OrthoFinder output from all 47 species
Spa_g13872 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14314 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26191 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26438 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27779 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g35237 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41856 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 97 119
IPR002885 Pentatricopeptide_repeat 125 155
IPR002885 Pentatricopeptide_repeat 521 545
IPR002885 Pentatricopeptide_repeat 199 221
IPR002885 Pentatricopeptide_repeat 421 444
IPR032867 DYW_dom 669 748
IPR002885 Pentatricopeptide_repeat 227 271
IPR002885 Pentatricopeptide_repeat 447 493
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 326 372
No external refs found!