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  5. Spa_g21739

Spa_g21739


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g21739

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00074810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G09740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g18476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18261.t1 Aspi01Gene18261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49546.t1 Aspi01Gene49546 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0154.g053494 No alias not classified & original description: CDS=419-901 0.03 OrthoFinder output from all 47 species
Azfi_s0455.g071315 RD2 not classified & original description: CDS=112-675 0.06 OrthoFinder output from all 47 species
Cre12.g542350 PHOS32, ATPHOS32 No description available 0.02 OrthoFinder output from all 47 species
Cre16.g649650 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g08808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35958 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009157001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01035248001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_32427 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g36600.1 LOC_Os07g36600 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36640.1 LOC_Os12g36640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g19283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10303844g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_61335g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g00391 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g29442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo69126 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc04g076200.3.1 Solyc04g076200 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g011660.3.1 Solyc09g011660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g04782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 1 156
No external refs found!