Spa_g21974 (ABCB19, ATABCB19,...)

Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g21974
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	ABCB19,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AMTR_s00090p00165440	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT2G36910	PGP1, ABCB1, ATPGP1	ATP binding cassette subfamily B1	0.04	OrthoFinder output from all 47 species
AT3G62150	PGP21	P-glycoprotein 21	0.02	OrthoFinder output from all 47 species
Adi_g010452	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g014378	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g021749	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g15212	PGP13	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g26174	No alias	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Als_g33230	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g13591	PGP6	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g22258	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene40552.t1	PGP1, ABCB1,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52651.t1	PGP2, Aspi01Gene52651	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g59935	ABCB19,...	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.06G076400.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g40237	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g13758	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01016706001	ABCB19,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01033645001	PGP1, ABCB1, ATPGP1	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Gb_07563	ABCB19,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_18150	PGP13	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Gb_33057	ABCB19,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_33058	ABCB19,...	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
LOC_Os01g18670.1	PGP21, LOC_Os01g18670	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os04g54930.1	ABCB19,...	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_10436810g0020	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_107576g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_93218g0010	PGP11	ABC transporter B family member 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_934204g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_9589971g0010	PGP10	ABC transporter B family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Ore_g09833	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g30543	PGP18	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g33236	ABCB19,...	ABC-B-type transporter *(AMN3) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g35743	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g43029	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g01067	PGP6	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g52431	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo408755	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Spa_g48523	PGP13	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g06699	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g08541	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g11197	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e025438_P001	PGP21, Zm00001e025438	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Zm00001e041008_P003	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006813	potassium ion transport	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0071805	potassium ion transmembrane transport	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	447	596
IPR003439	ABC_transporter-like_ATP-bd	1105	1253
IPR011527	ABC1_TM_dom	104	378
IPR011527	ABC1_TM_dom	764	1036

External Links

No external refs found!

Spa_g21974 (ABCB19, ATABCB19,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation