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  5. Spa_g22032

Spa_g22032 (PFN1, PRF1)


Aliases : PFN1, PRF1

Description : profilin actin nucleation protein & original description: none


Gene families : OG0000183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22032
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AT2G19760 PFN1, PRF1 profilin 1 0.06 OrthoFinder output from all 47 species
AT4G29340 PRF4 profilin 4 0.04 OrthoFinder output from all 47 species
Aev_g01728 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04370 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11589 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14096 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0195.g057229 PRF5 profilin actin nucleation protein & original... 0.02 OrthoFinder output from all 47 species
Ceric.09G056300.1 PFN3, PRF3,... profilin actin nucleation protein & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021434.19 No alias Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
Dcu_g00382 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g05880.1 PRF5, LOC_Os06g05880 profilin actin nucleation protein 0.03 OrthoFinder output from all 47 species
Len_g07662 PFN1, PRF1 profilin actin nucleation protein & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g08402 PFN3, PRF3 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05123 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06064 PRF5 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26903 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09381 PRF5 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31762 PRO2, PFN2, PRF2 profilin actin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25724 PRF5 profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012614 PFN3, PRF3 profilin actin nucleation protein & original... 0.02 OrthoFinder output from all 47 species
Sam_g18555 No alias profilin actin nucleation protein & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g008590.3.1 PFN1, PRF1,... profilin actin nucleation protein 0.04 OrthoFinder output from all 47 species
Tin_g37263 No alias profilin acTin nucleation protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005455 PFN 1 133
No external refs found!