1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g22065

Spa_g22065


Description : substrate adaptor of CUL3-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22065
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00175030 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g47800... 0.02 OrthoFinder output from all 47 species
AMTR_s00065p00211770 MAB4, NPY1, ENP,... BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
Adi_g073194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21093 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ala_g32547 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Als_g08124 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Als_g15298 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g15911 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Aob_g19940 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene00447.t1 Aspi01Gene00447 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene08949.t1 Aspi01Gene08949 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene41127.t1 Aspi01Gene41127 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Azfi_s0116.g046412 No alias not classified & original description: CDS=1316-3601 0.04 OrthoFinder output from all 47 species
Cba_g15372 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.11G059700.1 Ceric.11G059700 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.21G046900.1 Ceric.21G046900 not classified & original description: pacid=50604285... 0.03 OrthoFinder output from all 47 species
Ceric.32G010700.1 Ceric.32G010700 not classified & original description: pacid=50597870... 0.04 OrthoFinder output from all 47 species
Dac_g16053 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Dcu_g07068 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dcu_g08307 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dcu_g42627 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Dde_g31714 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
GSVIVT01012508001 RPT3, NPH3, JK218 Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01037852001 NPY2 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_32606 No alias BTB/POZ domain-containing protein At1g67900... 0.02 OrthoFinder output from all 47 species
LOC_Os02g35970.1 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
LOC_Os02g38120.1 LOC_Os02g38120 BTB/POZ domain-containing protein At1g67900... 0.02 OrthoFinder output from all 47 species
LOC_Os03g10800.2 NPY2, LOC_Os03g10800 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os09g09370.2 LOC_Os09g09370 BTB/POZ domain-containing protein At5g47800... 0.02 OrthoFinder output from all 47 species
Lfl_g06737 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
MA_52004g0010 RPT3, NPH3, JK218 component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Nbi_g10804 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ppi_g03108 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g39393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g098820.3.1 RPT3, NPH3,... Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Solyc05g013570.3.1 Solyc05g013570 BTB/POZ domain-containing protein At1g67900... 0.05 OrthoFinder output from all 47 species
Solyc10g047530.2.1 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
Spa_g14756 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Tin_g07210 No alias substrate adaptor of CUL3-based E3 ubiquiTin ligase... 0.04 OrthoFinder output from all 47 species
Zm00001e014883_P001 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Zm00001e014998_P003 Zm00001e014998 BTB/POZ domain-containing protein At1g67900... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 26 116
IPR027356 NPH3_dom 219 498
No external refs found!