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  5. Spa_g22565

Spa_g22565 (CDC20.2)


Aliases : CDC20.2

Description : substrate specificity component *(CDC20) of APC/C E3 ubiquitin ligase complex & original description: none


Gene families : OG0001302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22565

Target Alias Description ECC score Gene Family Method Actions
Als_g02480 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.07 OrthoFinder output from all 47 species
Dac_g04646 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.04 OrthoFinder output from all 47 species
Dcu_g05535 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Dde_g12307 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.05 OrthoFinder output from all 47 species
Dde_g22347 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.05 OrthoFinder output from all 47 species
Ehy_g27425 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
LOC_Os02g47180.2 CDC20.1, LOC_Os02g47180 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.02 OrthoFinder output from all 47 species
Pnu_g08227 CDC20.1 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Ppi_g02178 CDC20.1 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Zm00001e014230_P001 CDC20.1, Zm00001e014230 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 309 348
IPR001680 WD40_repeat 266 297
IPR024977 Apc4_WD40_dom 180 236
No external refs found!