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  5. Spa_g22687

Spa_g22687 (CCR2, ATGRP7, GRP7, GR-RBP7)


Aliases : CCR2, ATGRP7, GRP7, GR-RBP7

Description : not classified & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22687

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00103290 evm_27.TU.AmTr_v1... Organelle RRM domain-containing protein 2, mitochondrial... 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00256900 GRP2, ATGRP2,... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00198740 CCR2, ATGRP7,... Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00114p00125610 evm_27.TU.AmTr_v1... Small RNA-binding protein 11, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT3G23830 GR-RBP4, GRP4 glycine-rich RNA-binding protein 4 0.09 OrthoFinder output from all 47 species
AT4G13850 GRP2, ATGRP2, GR-RBP2 glycine-rich RNA-binding protein 2 0.04 OrthoFinder output from all 47 species
Adi_g022151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09046 No alias RNA chaperone *(RZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g38249 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24232 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27510 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32091 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01126 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29612 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15568.t1 ATRZ-1A, Aspi01Gene15568 RNA chaperone *(RZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16813.t1 GRP2, ATGRP2,... RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16822.t1 GRP2, ATGRP2,... RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009790 CCR2, ATGRP7,... not classified & original description: CDS=136-657 0.04 OrthoFinder output from all 47 species
Azfi_s0051.g031234 No alias not classified & original description: CDS=60-764 0.04 OrthoFinder output from all 47 species
Azfi_s0254.g060439 CCR2, ATGRP7,... not classified & original description: CDS=180-692 0.03 OrthoFinder output from all 47 species
Cba_g10906 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27479 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g48214 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G044500.1 Ceric.30G044500 RNA chaperone *(RZ1) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G070600.1 GR-RBP3, Ceric.34G070600 not classified & original description: pacid=50624018... 0.03 OrthoFinder output from all 47 species
Cre01.g032300 PAB2, PABP2, ATPAB2 No description available 0.01 OrthoFinder output from all 47 species
Dac_g03970 GR-RBP5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09825 GR-RBP4, GRP4 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g10484 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g24341 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33383 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00500 CCR2, ATGRP7,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g52563 CCR2, ATGRP7,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g26781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g06168 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29647 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436424g0010 ATRZ-1A RNA chaperone (RZ1|GR-RBP) 0.04 OrthoFinder output from all 47 species
MA_27149g0010 GR-RBP3 RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species
MA_77292g0010 No alias RNA editing factor (ORRM) 0.04 OrthoFinder output from all 47 species
MA_8928477g0010 GR-RBP3 RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species
Mp1g21200.1 GRP2, ATGRP2, GR-RBP2 RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species
Mp2g24130.1 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Msp_g12851 CCR2, ATGRP7,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g18229 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29443 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g05753 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12344 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12375 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43693 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10789 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18834 No alias RNA chaperone *(RZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c4_6610V3.1 GRP2, ATGRP2,... glycine-rich RNA-binding protein 3 0.05 OrthoFinder output from all 47 species
Sam_g48373 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo140819 GRP2, ATGRP2, GR-RBP2 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Solyc03g071560.4.1 Solyc03g071560 RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Solyc10g047130.2.1 ATRZ-1A, Solyc10g047130 RNA chaperone (RZ1|GR-RBP) 0.04 OrthoFinder output from all 47 species
Spa_g20439 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22300 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30660 GR-RBP3 RNA ediTing factor *(ORRM3) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e018330_P004 GR-RBP3, Zm00001e018330 RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species
Zm00001e028481_P002 GRP2, ATGRP2,... RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.07 OrthoFinder output from all 47 species
Zm00001e040294_P001 Zm00001e040294 RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 10 78
No external refs found!