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  5. Spa_g22850

Spa_g22850


Description : solute transporter *(AAAP) & original description: none


Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22850
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00061580 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
AMTR_s02064p00009480 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G02180 No alias Transmembrane amino acid transporter family protein 0.02 OrthoFinder output from all 47 species
Ala_g18469 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010795 No alias solute transporter *(AAAP) & original description: CDS=35-1210 0.03 OrthoFinder output from all 47 species
Cba_g30124 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g43215 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G003800.1 Ceric.04G003800 solute transporter *(AAAP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.31G038800.1 Ceric.31G038800 solute transporter *(AAAP) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.31G054000.1 Ceric.31G054000 solute transporter *(AAAP) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g09939 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06617 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25370 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g20398 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05277 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19449 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36554 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04230 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_25190V3.1 Pp3c3_25190 Transmembrane amino acid transporter family protein 0.01 OrthoFinder output from all 47 species
Ppi_g12008 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo438611 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Zm00001e030862_P001 Zm00001e030862 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 96 487
No external refs found!