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  5. Spa_g22954

Spa_g22954 (ATH1, ATATH1, ABCA2)


Aliases : ATH1, ATATH1, ABCA2

Description : subfamily ABCA transporter & original description: none


Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22954

Target Alias Description ECC score Gene Family Method Actions
Ala_g07489 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016230 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: CDS=354-3422 0.03 OrthoFinder output from all 47 species
Ceric.02G040100.1 ATH1, ATATH1,... subfamily ABCA transporter & original description:... 0.04 OrthoFinder output from all 47 species
Cre14.g613950 ATH1, ATATH1, ABCA2 ABC transporter A family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g10442 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34266 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08580 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06474 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g113070.4.1 ATH1, ATATH1,... fatty acid transporter (ABCA). subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
Solyc06g070940.4.1 ATH1, ATATH1,... fatty acid transporter (ABCA). subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
Zm00001e004192_P001 ATH1, ATATH1,... fatty acid transporter (ABCA). subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 566 710
No external refs found!